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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs62381118 chr5:120173399 A/G PBX3 chr9:128509624-128729656:+ 0.26 6.17 1.49E-9 Box Plot
THCA rs62381648 chr5:170806428 G/A CLEC2D chr12:9817565-9852151:+ -0.2 -6.15 1.67E-9 Box Plot
THCA rs62383962 chr5:170823913 G/A CLEC2D chr12:9817565-9852151:+ -0.18 -5.92 6.03E-9 Box Plot
THCA rs62383963 chr5:170823964 T/C CLEC2D chr12:9817565-9852151:+ -0.18 -5.92 6.03E-9 Box Plot
THCA rs62383964 chr5:170824594 A/G CLEC2D chr12:9817565-9852151:+ -0.18 -5.92 6.03E-9 Box Plot
THCA rs62383969 chr5:170828170 C/T CLEC2D chr12:9817565-9852151:+ -0.18 -5.92 6.03E-9 Box Plot
THCA rs62383974 chr5:170840021 C/T CLEC2D chr12:9817565-9852151:+ -0.2 -6.38 4.07E-10 Box Plot
THCA rs62383975 chr5:170840142 A/G CLEC2D chr12:9817565-9852151:+ -0.19 -6 3.88E-9 Box Plot
THCA rs62383977 chr5:170841747 C/T CLEC2D chr12:9817565-9852151:+ -0.2 -6.38 4.07E-10 Box Plot
THCA rs623907 chr11:77501448 T/A INTS4L1 chr7:64601603-64694600:+ 0.62 10.05 1.05E-21 Box Plot
THCA rs62394463 chr5:151683197 C/T FILIP1L chr3:99548985-99833357:- 0.22 6.13 1.81E-9 Box Plot
THCA rs62394464 chr5:151683254 G/A FILIP1L chr3:99548985-99833357:- 0.22 6.13 1.81E-9 Box Plot
THCA rs62394475 chr5:151689284 T/C FILIP1L chr3:99548985-99833357:- 0.22 6.29 7.29E-10 Box Plot
THCA rs62394558 chr6:26604650 G/A ZNF322B chr9:99957633-99961910:- 0.7 14.12 4.21E-38 Box Plot
THCA rs62396201 chr6:26668216 G/A ZNF322B chr9:99957633-99961910:- 0.73 14.47 1.3E-39 Box Plot